Well what a fun week. Found out I left in a single line on my robots text file that was only there for the site while I was testing. Obviously, I didn't want the test site indexed. Unfortunately, that line was still when I took the site live so much for search engine indexing.
Ah well, back to the drawing board for a while.
I will try not to freak out while I wait for the pages to be picked up again... sigh.